Juicebox
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  • Juicebox (Desktop)
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  • Bonus: Running Juicer Tools Analysis
  • Bonus: Accessing Raw Data for Analysis
  • Bonus: Assembly Tools (Desktop)
  • Bonus: Submapping (Desktop)
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Bonus: Submapping (Desktop)

PreviousBonus: Assembly Tools (Desktop)

Last updated 5 years ago

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Juicebox can visualize discontinuous regions from across the genome by stitching them together, with resolution, normalization, color scale, and even VS mode being preserved!

Detailed walkthrough available at

https://github.com/aidenlab/Juicebox/wiki/Submapping
Superenhancer clique with cohesin degradation from Rao et al. Cell 2017
Submapping · aidenlab/Juicebox WikiGitHub
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