Bonus: Submapping (Desktop)

Juicebox can visualize discontinuous regions from across the genome by stitching them together, with resolution, normalization, color scale, and even VS mode being preserved!

Superenhancer clique with cohesin degradation from Rao et al. Cell 2017

Detailed walkthrough available at https://github.com/aidenlab/Juicebox/wiki/Submapping

Submapping · aidenlab/Juicebox WikiGitHub