Welcome!
Background
Juicebox (Web)
Loading Annotations (Web)
Comparing Maps (Web)
Sharing URLs (Web)
Hosting with Dropbox/Drive/GEO
Visualize from ENCODE website
Practice: Interactive Figure
Juicebox (Desktop)
Loading Annotations (Desktop)
Comparing Maps (Desktop)
Drawing Custom Annotations (Desktop)
Additional Resources
Bonus: Running Juicer Tools Analysis
Bonus: Accessing Raw Data for Analysis
Bonus: Assembly Tools (Desktop)
Bonus: Submapping (Desktop)

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Bonus: Submapping (Desktop)

PreviousBonus: Assembly Tools (Desktop)

Last updated 5 years ago

Juicebox can visualize discontinuous regions from across the genome by stitching them together, with resolution, normalization, color scale, and even VS mode being preserved!

Detailed walkthrough available at https://github.com/aidenlab/Juicebox/wiki/Submapping

Submapping · aidenlab/Juicebox WikiGitHub