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Visualize from ENCODE website

PreviousHosting with Dropbox/Drive/GEONextPractice: Interactive Figure

Last updated 4 years ago

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Hi-C experiments can also be visualized directly from the ENCODE website at https://www.encodeproject.org/. In the search bar at the top, enter erez-aiden HMEC On the left, click "Experiment" to filter.

Click the experiment ENCSR380YQA and scroll down to Files. Click the tab "File Details".

At the left, under Filter files, click "mapping quality thresholded chromatin interactions". Then you can select any number and click the blue Visualize button. A new Juicebox will open with the selected files loaded.